DeNovoGUI
DeNovoGUI provides an easy to use graphical front end to two algorithms for de novo sequencing of MS//MS spectra:
PepNovo+ and DirecTag.
To start the sequencing all you have to do is to select (i) the spectrum file(s) (in the mgf format), (ii) the settings to use, and
(iii) the output folder for the sequencing results. During sequencing you will be informed of the progress and as soon as the
process is complete the results will be displayed with the found sequences annotated on the spectra.
DeNovoGUI can also be run in command line mode. For more details see DeNovoCLI.
For any questions, feel free to contact the authors at the DeNovoGUI Google Group.
For news and updates on the software visit the DeNovoGUI website:
http://denovogui.googlecode.com.
Please cite DeNovoGUI as Muth et al.: J Proteome Res. 2014 Feb 7;13(2):1143-6.
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